CDS

Accession Number TCMCG057C22570
gbkey CDS
Protein Id XP_018493360.1
Location join(1545908..1546043,1546470..1546594,1546674..1546808,1546877..1546949,1547035..1547108,1547187..1547291,1547370..1547614,1547700..1547787,1547876..1548075,1548168..1548296,1548370..1548442,1548523..1548687,1548780..1548911)
Gene LOC108863436
GeneID 108863436
Organism Raphanus sativus

Protein

Length 559aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018637858.1
Definition PREDICTED: zeta-carotene desaturase, chloroplastic/chromoplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Q
Description Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R04798        [VIEW IN KEGG]
R04800        [VIEW IN KEGG]
R07511        [VIEW IN KEGG]
R09656        [VIEW IN KEGG]
R09658        [VIEW IN KEGG]
KEGG_rclass RC01214        [VIEW IN KEGG]
RC01959        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00514        [VIEW IN KEGG]
EC 1.3.5.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009509        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016120        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0016635        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0046246        [VIEW IN EMBL-EBI]
GO:0052886        [VIEW IN EMBL-EBI]
GO:0052889        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901175        [VIEW IN EMBL-EBI]
GO:1901177        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTCATCGATCGTTTTCGCTGCAACTCCAGCTACTGCTGGGTTCCTCTCCTCTATTCCTCCTTGGAAGGCCCCTCGGAGATTTCATGTTAGGTCTTCACTTGACGACGATGTTTCCGACATGAGTGTTAACGCTCCAAAGGGGCTGTTTCCTCCAGAGCCAGTACCTTACAAGGGACCGAAGCTGAAAGTAGCTATCATAGGAGCTGGACTTGCTGGCATGTCAACTGCTGTTGAGCTTCTCGATCAGGGTCACGAGGTGGATATATATGATTCAAGGACTTTCATTGGTGGCAAAGTTGGTTCTTTTGTAGATAGACGAGGGAACCACATCGAAATGGGTCTACATGTCTTCTTCGGATGCTATAACAATCTCTTCCGCTTGATGAAAAAGGTGGGAGCTGATAAGAACCTTCTTGTCAAAGACCACACTCATACATTTATAAACAAAGGCAGCGAAATTGGAGAGCTTGATTTTCGGTTTCCTGTTGGAGCTCCAATTCACGGTATCCGCGCCTTTTTAGTCACAAATCAACTCAAGCCATATGACAAGCTGAGGAACTCACTAGCTCTTGCATTGAGCCCTGTCGTTAAAGCTCTTGTTAACCCTGATGGAGCAATGCAAGACATTCGCAACCTAGACAGCATAAGTTTCTCGGATTGGTTCCTCTCTAAAGGTGGGACGAGGGCGAGTATCCAGAGAATGTGGGATCCTGTTGCGTACGCACTCGGTTTCATAGACTGCGATAACATGAGTGCAAGATGCATGCTTACCATATTCTCATTGTTCGCCACCAAAACAGAAGCTTCTTTGTTGCGTATGCTCAAGGGCTCCCCTGATGTTTACTTGAGTGGTCCTATCAAACAATACATCACAGATAGAGGTGGCAGAATCCATCTAAGGTGGGGTTGCAGGGAGATACTTTATGATAAATCAGCAGATGGAGAAACTTATGTCACAGGACTAGCAGTTTCCAAGGCTACAGACAAGAAGGTTGTGAAAGCTGATGTATATGTTGCAGCATGTGATGTACCGGGAATCAAAAGGCTACTTCCCAAAGAATGGCGAGAATCTCGTTTCTTCAACGATATATACGAACTAGAGGGAGTACCTGTTTGCACGGTGCAGCTCAGATACAATGGCTGGGTCACTGAGTTGGAAGACATTGAACTTTCCAGGCAGTTGAAACGAGCGGTTGGTTTAGATAACCTTCTCTACACTCCTGATGCTGATTTCTCATGCTTTGCGGATCTTGCGCTCGCTTCGCCTGCTGATTATTACATTGAAGGACAAGGCTCTCTGCTTCAGTGCGTTTTGACGCCAGGAGATCCCTACATGCGATTAACAAACGATAAGATCATAGAGAAAGTAGCAATGCAGGTCACAGAGTTGTTTCCATCGTCGCGTGGTCTAGAAGTCACCTGGTCATCAGTTGTCAAAATAGCTCAGTCTCTGTACCGTGAAGCACCAGGCAAAGATCCATTTAGACCTGATCAGAAGACTCCTGTAAAGAACTTCTTCCTCGCTGGTTCCTACACAAAGCAGGATTACATTGATAGTATGGAAGGAGCAACATTGTCAGGGAGACAAGCTTCGTCATATATCTGTGACGCCGGTGAAGAACTAGCTGAGCTAAACAAGAAGCTTTCTCCTTCAGATGAGCTAAGTCTTGTCTAA
Protein:  
MASSIVFAATPATAGFLSSIPPWKAPRRFHVRSSLDDDVSDMSVNAPKGLFPPEPVPYKGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVGADKNLLVKDHTHTFINKGSEIGELDFRFPVGAPIHGIRAFLVTNQLKPYDKLRNSLALALSPVVKALVNPDGAMQDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNMSARCMLTIFSLFATKTEASLLRMLKGSPDVYLSGPIKQYITDRGGRIHLRWGCREILYDKSADGETYVTGLAVSKATDKKVVKADVYVAACDVPGIKRLLPKEWRESRFFNDIYELEGVPVCTVQLRYNGWVTELEDIELSRQLKRAVGLDNLLYTPDADFSCFADLALASPADYYIEGQGSLLQCVLTPGDPYMRLTNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSPSDELSLV